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SLX4IP SLX4 interacting protein [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101950748, updated on 1-Aug-2024

Summary

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Gene symbol
SLX4IP
Gene description
SLX4 interacting protein
See related
Ensembl:ENSCPBG00000023328
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 3 NC_088793.1 (198892047..199012657, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 3 NC_024220.1 (3634277..3753518, complement)

Chromosome 3 - NC_088793.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122173125 Neighboring gene jagged canonical Notch ligand 1 Neighboring gene uncharacterized LOC135982567 Neighboring gene uncharacterized LOC135982568 Neighboring gene uncharacterized LOC135982566 Neighboring gene MKKS centrosomal shuttling protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein SLX4IP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088793.1 Reference ASM1138683v2

    Range
    198892047..199012657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005287402.5 → XP_005287459.1  protein SLX4IP isoform X3

    UniProtKB/TrEMBL
    A0A8C3IIH0, A0AAJ7Y7W3
    Related
    ENSCPBP00000033351.1
    Conserved Domains (1) summary
    pfam15744
    Location:10 → 378
    UPF0492; Uncharacterized protein family UPF0492

  2. XM_042846916.2 → XP_042702850.1  protein SLX4IP isoform X1

    UniProtKB/TrEMBL
    A0A8C3PCW1, A0AAJ7Y7W3
    Conserved Domains (1) summary
    pfam15744
    Location:43 → 411
    UPF0492; Uncharacterized protein family UPF0492

  3. XM_042846925.2 → XP_042702859.1  protein SLX4IP isoform X5

    UniProtKB/TrEMBL
    A0A8C3IJD4, A0AAJ7Y7W0

  4. XM_065589761.1 → XP_065445833.1  protein SLX4IP isoform X2

    UniProtKB/TrEMBL
    A0AAJ7Y7W3

  5. XM_065589762.1 → XP_065445834.1  protein SLX4IP isoform X4

    UniProtKB/TrEMBL
    A0A8C3IJD4

  6. XM_065589763.1 → XP_065445835.1  protein SLX4IP isoform X4

    UniProtKB/TrEMBL
    A0A8C3IJD4

RNA

  1. XR_010599978.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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