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MINDY2 MINDY lysine 48 deubiquitinase 2 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101948451, updated on 1-Aug-2024

Summary

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Gene symbol
MINDY2
Gene description
MINDY lysine 48 deubiquitinase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Also known as
FAM63B
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 10 NC_088800.1 (27266871..27374229)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007359888.1 (2492783..2606952)

Chromosome 10 - NC_088800.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 10 Neighboring gene uncharacterized LOC135973735 Neighboring gene SAFB like transcription modulator Neighboring gene uncharacterized LOC135973736 Neighboring gene ring finger protein 111

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K48-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K48-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase MINDY-2
Names
family with sequence similarity 63 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088800.1 Reference ASM1138683v2

    Range
    27266871..27374229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065558272.1 → XP_065414344.1  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X7

  2. XM_065558271.1 → XP_065414343.1  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X6

    UniProtKB/TrEMBL
    A0AAJ7QRA3

  3. XM_065558269.1 → XP_065414341.1  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X2

  4. XM_065558270.1 → XP_065414342.1  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X5

    UniProtKB/TrEMBL
    A0AAJ7QRE4

  5. XM_065558268.1 → XP_065414340.1  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X1

    UniProtKB/TrEMBL
    A0AAJ7QRA3

  6. XM_008164104.4 → XP_008162326.2  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X4

    UniProtKB/TrEMBL
    A0AAJ7QRE4

  7. XM_024101855.3 → XP_023957623.2  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X3

    UniProtKB/TrEMBL
    A0AAJ7QRA3

RNA

  1. XR_010590729.1 RNA Sequence

  2. XR_010590730.1 RNA Sequence

  3. XR_010590727.1 RNA Sequence

  4. XR_010590726.1 RNA Sequence

  5. XR_010590725.1 RNA Sequence

  6. XR_010590728.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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