U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRDMT1 tRNA aspartic acid methyltransferase 1 [ Chrysemys picta (Painted turtle) ]

Gene ID: 101948080, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRDMT1
Gene description
tRNA aspartic acid methyltransferase 1
See related
Ensembl:ENSCPBG00000021187
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885727.1 (408980..459967, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 2 NC_024219.1 (408625..459981, complement)

NW_024885727.1Genomic Context describing neighboring genes Neighboring gene Ras suppressor protein 1 Neighboring gene uncharacterized LOC122174329 Neighboring gene cubilin Neighboring gene vimentin Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tRNA (cytosine(38)-C(5))-methyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NW_024885727.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    408980..459967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005282445.4 → XP_005282502.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X5

    Conserved Domains (1) summary
    cl30459
    Location:1 → 327
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  2. XM_024106244.2 → XP_023962012.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A8C3I824
    Related
    ENSCPBP00000030089.1
    Conserved Domains (1) summary
    cl17173
    Location:5 → 370
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_005282443.3 → XP_005282500.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X1

    Conserved Domains (1) summary
    cd00315
    Location:5 → 398
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  4. XM_042856702.1 → XP_042712636.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X5

    Conserved Domains (1) summary
    cl30459
    Location:1 → 327
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  5. XM_005282444.3 → XP_005282501.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X2

    Conserved Domains (1) summary
    cl17173
    Location:25 → 396
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  6. XM_024106250.2 → XP_023962018.1  tRNA (cytosine(38)-C(5))-methyltransferase isoform X4

    UniProtKB/TrEMBL
    A0A8C3IBP4
    Related
    ENSCPBP00000030088.1
    Conserved Domains (1) summary
    cl17173
    Location:5 → 369
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.