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CALR3 calreticulin 3 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101942397, updated on 1-Aug-2024

Summary

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Gene symbol
CALR3
Gene description
calreticulin 3
See related
Ensembl:ENSCPBG00000014982
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 25 NC_088815.1 (16839365..16853465)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281415.1 (3919066..3933107)

Chromosome 25 - NC_088815.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E1 Neighboring gene calcium homeostasis endoplasmic reticulum protein Neighboring gene chromosome 25 C19orf44 homolog Neighboring gene epidermal growth factor receptor pathway substrate 15 like 1 Neighboring gene KLF transcription factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calreticulin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088815.1 Reference ASM1138683v2

    Range
    16839365..16853465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065578375.1 → XP_065434447.1  calreticulin-3 isoform X1

    UniProtKB/TrEMBL
    A0A8C3HNW7

  2. XM_024108217.3 → XP_023963985.1  calreticulin-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C3HNW7, A0AAJ7QZ16
    Related
    ENSCPBP00000020868.1
    Conserved Domains (1) summary
    pfam00262
    Location:55 → 364
    Calreticulin; Calreticulin family
Nucleotide Protein
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