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P3H4 prolyl 3-hydroxylase family member 4 (inactive) [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101942374, updated on 1-Aug-2024

Summary

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Gene symbol
P3H4
Gene description
prolyl 3-hydroxylase family member 4 (inactive)
See related
Ensembl:ENSCPBG00000006605
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See P3H4 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 24 NC_088814.1 (2108998..2121752)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007359872.1 (6468710..6480458, complement)

Chromosome 24 - NC_088814.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 11 Neighboring gene 5'-nucleotidase, cytosolic IIIB Neighboring gene kelch like family member 10 Neighboring gene FKBP prolyl isomerase 10 Neighboring gene junction plakoglobin Neighboring gene keratin-associated protein 10-8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen fibril organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoplasmic reticulum protein SC65
Names
prolyl 3-hydroxylase family member 4 (non-enzymatic)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088814.1 Reference ASM1138683v2

    Range
    2108998..2121752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005294182.4 → XP_005294239.2  endoplasmic reticulum protein SC65

    UniProtKB/TrEMBL
    A0A8C3FLK6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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