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LOC101940351 protein NPAT [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101940351, updated on 1-Aug-2024

Summary

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Gene symbol
LOC101940351
Gene description
protein NPAT
See related
Ensembl:ENSCPBG00000018558
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Also known as
NPAT
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 1 NC_088791.1 (317831200..317866989)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281505.1 (328..36751)

Chromosome 1 - NC_088791.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101947996 Neighboring gene protein O-glucosyltransferase 3 Neighboring gene chromosome 1 C11orf65 homolog Neighboring gene ATM serine/threonine kinase Neighboring gene uncharacterized LOC135980912 Neighboring gene acetyl-CoA acetyltransferase 1 Neighboring gene cullin 5 Neighboring gene uncharacterized LOC135980913 Neighboring gene RAB39A, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein NPAT
Names
nuclear protein, ataxia-telangiectasia locus

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088791.1 Reference ASM1138683v2

    Range
    317831200..317866989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005289959.5 → XP_005290016.2  protein NPAT isoform X4

    UniProtKB/TrEMBL
    A0AAJ6R9V7

  2. XM_005289960.5 → XP_005290017.2  protein NPAT isoform X1

    UniProtKB/TrEMBL
    A0AAJ6R9Q7

  3. XM_005289961.5 → XP_005290018.2  protein NPAT isoform X2

    UniProtKB/TrEMBL
    A0AAJ6R9H1

  4. XM_065581474.1 → XP_065437546.1  protein NPAT isoform X3

    UniProtKB/TrEMBL
    A0AAJ6R9H1

  5. XM_042855035.2 → XP_042710969.1  protein NPAT isoform X5

    UniProtKB/TrEMBL
    A0A8C3HZP2, A0AAJ7YN66
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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