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Imp3 IMP U3 small nucleolar ribonucleoprotein 3 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101843750, updated on 8-Mar-2024

Summary

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Gene symbol
Imp3
Gene description
IMP U3 small nucleolar ribonucleoprotein 3
See related
EnsemblRapid:ENSMAUG00000010279
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429203.1 (35332035..35333037)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801622.1 (19453986..19455002)

NW_024429203.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate proteoglycan 4 Neighboring gene sorting nexin 33 Neighboring gene snurportin 1 Neighboring gene protein tyrosine phosphatase non-receptor type 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar ribonucleoprotein protein IMP3
Names
IMP3, U3 small nucleolar ribonucleoprotein, homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429203.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    35332035..35333037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013112804.3 → XP_012968258.1  U3 small nucleolar ribonucleoprotein protein IMP3

    UniProtKB/TrEMBL
    A0A1U8BXJ1
    Related
    ENSMAUP00000026032.1, ENSMAUT00000036666.1
    Conserved Domains (3) summary
    COG0522
    Location:1 → 168
    RpsD; Ribosomal protein S4 or related protein [Translation, ribosomal structure and biogenesis]
    pfam00163
    Location:5 → 65
    Ribosomal_S4; Ribosomal protein S4/S9 N-terminal domain
    pfam01479
    Location:109 → 155
    S4; S4 domain
Nucleotide Protein
Heading Accession and Version

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