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Otulin OTU deubiquitinase with linear linkage specificity [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101838883, updated on 8-Mar-2024

Summary

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Gene symbol
Otulin
Gene description
OTU deubiquitinase with linear linkage specificity
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Also known as
Fam105b
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429198.1 (21227552..21253602, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801716.1 (6453136..6477307, complement)

NW_024429198.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110342959 Neighboring gene ANKH inorganic pyrophosphate transport regulator Neighboring gene OTU deubiquitinase with linear linkage specificity like Neighboring gene uncharacterized LOC110342960

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein linear deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin thioesterase otulin
Names
family with sequence similarity 105, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429198.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    21227552..21253602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040757676.1 → XP_040613610.1  ubiquitin thioesterase otulin isoform X4

  2. XM_040757672.1 → XP_040613606.1  ubiquitin thioesterase otulin isoform X1

    UniProtKB/TrEMBL
    A0A3Q0D4W8
    Conserved Domains (1) summary
    pfam16218
    Location:81 → 344
    Peptidase_C101; Peptidase family C101

  3. XM_040757674.1 → XP_040613608.1  ubiquitin thioesterase otulin isoform X3

  4. XM_040757673.1 → XP_040613607.1  ubiquitin thioesterase otulin isoform X2

  5. XM_040757677.1 → XP_040613611.1  ubiquitin thioesterase otulin isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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