U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Arhgap5 Rho GTPase activating protein 5 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101832390, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Arhgap5
Gene description
Rho GTPase activating protein 5
See related
EnsemblRapid:ENSMAUG00000008108
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Arhgap5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429186.1 (63363632..63439887, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801703.1 (126218..199389)

NW_024429186.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase BRSK1-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC121139384 Neighboring gene uncharacterized LOC121139385 Neighboring gene uncharacterized LOC110342049

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rho GTPase-activating protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429186.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    63363632..63439887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040743102.1 → XP_040599036.1  rho GTPase-activating protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CA13
    Conserved Domains (5) summary
    smart00441
    Location:428 → 481
    FF; Contains two conserved F residues
    cd04373
    Location:1261 → 1445
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    pfam16512
    Location:260 → 338
    RhoGAP-FF1; p190-A and -B Rho GAPs FF domain
    cd22220
    Location:592 → 762
    pseudoGTPaseD_p190RhoGAP-B; pseudoGTPase domain found in p190RhoGAP-B and similar proteins
    cl38936
    Location:31 → 246
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_040743103.1 → XP_040599037.1  rho GTPase-activating protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CA13
    Related
    ENSMAUP00000050563.1, ENSMAUT00000065729.1
    Conserved Domains (5) summary
    smart00441
    Location:428 → 481
    FF; Contains two conserved F residues
    cd04373
    Location:1261 → 1445
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    pfam16512
    Location:260 → 338
    RhoGAP-FF1; p190-A and -B Rho GAPs FF domain
    cd22220
    Location:592 → 762
    pseudoGTPaseD_p190RhoGAP-B; pseudoGTPase domain found in p190RhoGAP-B and similar proteins
    cl38936
    Location:31 → 246
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_040743104.1 → XP_040599038.1  rho GTPase-activating protein 5 isoform X2

    Related
    ENSMAUP00000050540.1, ENSMAUT00000063201.1
    Conserved Domains (3) summary
    smart00441
    Location:428 → 481
    FF; Contains two conserved F residues
    cd04373
    Location:1260 → 1444
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    cl38936
    Location:31 → 246
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  4. XM_005080496.4 → XP_005080553.1  rho GTPase-activating protein 5 isoform X1

    See identical proteins and their annotated locations for XP_005080553.1

    UniProtKB/TrEMBL
    A0A1U8CA13
    Related
    ENSMAUP00000006036.1, ENSMAUT00000009826.2
    Conserved Domains (5) summary
    smart00441
    Location:428 → 481
    FF; Contains two conserved F residues
    cd04373
    Location:1261 → 1445
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    pfam16512
    Location:260 → 338
    RhoGAP-FF1; p190-A and -B Rho GAPs FF domain
    cd22220
    Location:592 → 762
    pseudoGTPaseD_p190RhoGAP-B; pseudoGTPase domain found in p190RhoGAP-B and similar proteins
    cl38936
    Location:31 → 246
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  5. XM_013120848.3 → XP_012976302.1  rho GTPase-activating protein 5 isoform X1

    See identical proteins and their annotated locations for XP_012976302.1

    UniProtKB/TrEMBL
    A0A1U8CA13
    Conserved Domains (5) summary
    smart00441
    Location:428 → 481
    FF; Contains two conserved F residues
    cd04373
    Location:1261 → 1445
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    pfam16512
    Location:260 → 338
    RhoGAP-FF1; p190-A and -B Rho GAPs FF domain
    cd22220
    Location:592 → 762
    pseudoGTPaseD_p190RhoGAP-B; pseudoGTPase domain found in p190RhoGAP-B and similar proteins
    cl38936
    Location:31 → 246
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.