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Zbtb8os zinc finger and BTB domain containing 8 opposite strand [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101831955, updated on 8-Mar-2024

Summary

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Gene symbol
Zbtb8os
Gene description
zinc finger and BTB domain containing 8 opposite strand
See related
EnsemblRapid:ENSMAUG00000021172
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Zbtb8os in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429197.1 (13759545..13771049, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801696.1 (2663791..2675315)

NW_024429197.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene RB binding protein 4, chromatin remodeling factor Neighboring gene syncoilin, intermediate filament protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tRNA-splicing ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein archease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429197.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    13759545..13771049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040756561.1 → XP_040612495.1  protein archease isoform X2

    Related
    ENSMAUP00000038675.1, ENSMAUT00000055202.1
    Conserved Domains (1) summary
    cl00606
    Location:29 → 98
    Archease; Archease protein family (MTH1598/TM1083)

  2. XM_040756562.1 → XP_040612496.1  protein archease isoform X3

    Conserved Domains (1) summary
    cl00606
    Location:30 → 109
    Archease; Archease protein family (MTH1598/TM1083)

  3. XM_005079483.4 → XP_005079540.1  protein archease isoform X1

    See identical proteins and their annotated locations for XP_005079540.1

    UniProtKB/TrEMBL
    A0A1U7QI89
    Related
    ENSMAUP00000030260.1, ENSMAUT00000075168.1
    Conserved Domains (1) summary
    pfam01951
    Location:31 → 167
    Archease; Archease protein family (MTH1598/TM1083)

RNA

  1. XR_001197038.3 RNA Sequence

    Related
    ENSMAUT00000028271.2
Nucleotide Protein
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Gene LinkOut

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