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Cdc40 cell division cycle 40 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101831403, updated on 8-Mar-2024

Summary

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Gene symbol
Cdc40
Gene description
cell division cycle 40
See related
EnsemblRapid:ENSMAUG00000019051
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429199.1 (3026587..3067422)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801642.1 (3066082..3106900)

NW_024429199.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 6 Neighboring gene WASP family member 1 Neighboring gene methyltransferase like 24 Neighboring gene D-aspartate oxidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-processing factor 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429199.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    3026587..3067422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021229061.2 → XP_021084720.1  pre-mRNA-processing factor 17

    UniProtKB/TrEMBL
    A0A3Q0CQ99
    Related
    ENSMAUP00000021265.1, ENSMAUT00000025260.2
    Conserved Domains (2) summary
    cd00200
    Location:281 → 579
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:292 → 330
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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