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PPIB peptidylprolyl isomerase B [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101815932, updated on 3-Aug-2024

Summary

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Gene symbol
PPIB
Gene description
peptidylprolyl isomerase B
See related
Ensembl:ENSFALG00000023690
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 10 NC_021682.1 (3349905..3354183, complement)

Chromosome 10 - NC_021682.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 1 Neighboring gene sorting nexin 22 Neighboring gene casein kinase 1 gamma 1 Neighboring gene thyroid hormone receptor interactor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021682.1 Chromosome 10 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptidyl-prolyl cis-trans isomerase B
Names
peptidylprolyl isomerase B (cyclophilin B)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021682.1 Reference FicAlb1.5 Primary Assembly

    Range
    3349905..3354183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005051825.1 → XP_005051882.1  peptidyl-prolyl cis-trans isomerase B

    UniProtKB/TrEMBL
    A0A803W641
    Related
    ENSFALP00000030447.1, ENSFALT00000037759.1
    Conserved Domains (1) summary
    cd01926
    Location:66 → 224
    cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
Nucleotide Protein
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