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Lrrc17 leucine rich repeat containing 17 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101726213, updated on 8-Mar-2024

Summary

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Gene symbol
Lrrc17
Gene description
leucine rich repeat containing 17
Locus tag
GW7_03900
See related
Ensembl:ENSHGLG00000007872
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624739.1 (26266863..26299009, complement)

NW_004624739.1Genomic Context describing neighboring genes Neighboring gene N-acyl phosphatidylethanolamine phospholipase D Neighboring gene armadillo repeat containing 10 Neighboring gene F-box and leucine rich repeat protein 13 Neighboring gene ATP-binding cassette sub-family E member 1 pseudogene Neighboring gene family with sequence similarity 185 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624739 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 17
Names
Leucine-rich repeat-containing protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624739.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    26266863..26299009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021253960.1 → XP_021109619.1  leucine-rich repeat-containing protein 17 isoform X2

    UniProtKB/TrEMBL
    A0A0P6J7W0, G5BI55
    Conserved Domains (4) summary
    sd00031
    Location:64 → 84
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:187 → 266
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:107 → 165
    LRR_8; Leucine rich repeat
    cl15307
    Location:164 → 196
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  2. XM_004839730.2 → XP_004839787.1  leucine-rich repeat-containing protein 17 isoform X1

    UniProtKB/TrEMBL
    A0A0P6J7W0
    Related
    ENSHGLP00000010970.1, ENSHGLT00000011093.1
    Conserved Domains (3) summary
    sd00033
    Location:64 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:273 → 329
    LRR_8; Leucine rich repeat
    cl15307
    Location:164 → 196
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  3. XM_021253959.1 → XP_021109618.1  leucine-rich repeat-containing protein 17 isoform X1

    UniProtKB/TrEMBL
    A0A0P6J7W0
    Conserved Domains (3) summary
    sd00033
    Location:64 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:273 → 329
    LRR_8; Leucine rich repeat
    cl15307
    Location:164 → 196
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
Heading Accession and Version

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