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Snai2 snail family transcriptional repressor 2 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101717470, updated on 8-Mar-2024

Summary

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Gene symbol
Snai2
Gene description
snail family transcriptional repressor 2
Locus tag
GW7_21523
See related
Ensembl:ENSHGLG00000009439
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624735.1 (6594564..6598288)

NW_004624735.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110347680 Neighboring gene pancreatic progenitor cell differentiation and proliferation factor like Neighboring gene uncharacterized LOC110346922 Neighboring gene calaxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624735 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein SNAI2
Names
Zinc finger protein SNAI2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624735.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    6594564..6598288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004837528.3 → XP_004837585.1  zinc finger protein SNAI2

    See identical proteins and their annotated locations for XP_004837585.1

    UniProtKB/TrEMBL
    G5BHT1
    Related
    ENSHGLP00000013215.1, ENSHGLT00000013354.1
    Conserved Domains (4) summary
    sd00017
    Location:187 → 207
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:130 → 150
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:213 → 235
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:200 → 223
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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