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Pla2g6 phospholipase A2 group VI [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101710669, updated on 8-Mar-2024

Summary

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Gene symbol
Pla2g6
Gene description
phospholipase A2 group VI
Locus tag
GW7_02573
See related
Ensembl:ENSHGLG00000013972
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624752.1 (9792778..9841817)

NW_004624752.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184B Neighboring gene MAF bZIP transcription factor F Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene solute carrier family 16 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624752 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2
Names
85 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624752.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    9792778..9841817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013072561.2 → XP_012928015.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    See identical proteins and their annotated locations for XP_012928015.1

    UniProtKB/TrEMBL
    G5AYS6
    Related
    ENSHGLP00000019510.1, ENSHGLT00000019703.1
    Conserved Domains (4) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:285 → 392
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:291 → 380
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  2. XM_013072563.2 → XP_012928017.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    UniProtKB/TrEMBL
    G5AYS6
    Conserved Domains (4) summary
    cd07212
    Location:480 → 737
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:285 → 392
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:291 → 380
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  3. XM_004845619.3 → XP_004845676.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    See identical proteins and their annotated locations for XP_004845676.1

    UniProtKB/TrEMBL
    G5AYS6
    Related
    ENSHGLP00000019512.1, ENSHGLT00000019705.1
    Conserved Domains (4) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:285 → 392
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:291 → 380
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  4. XM_013072562.2 → XP_012928016.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    UniProtKB/TrEMBL
    A0A0P6K3B4
    Related
    ENSHGLP00000019511.1, ENSHGLT00000019704.1
    Conserved Domains (4) summary
    cd07212
    Location:426 → 739
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:285 → 392
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:291 → 380
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  5. XM_021259012.1 → XP_021114671.1  85/88 kDa calcium-independent phospholipase A2 isoform X6

    Conserved Domains (3) summary
    cd07212
    Location:269 → 582
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:74 → 181
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:75 → 103
    ANK; ANK repeat [structural motif]

  6. XM_021259010.1 → XP_021114669.1  85/88 kDa calcium-independent phospholipase A2 isoform X4

    UniProtKB/TrEMBL
    G5AYS6
    Conserved Domains (3) summary
    cd07212
    Location:350 → 663
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:155 → 262
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:156 → 184
    ANK; ANK repeat [structural motif]

  7. XM_021259011.1 → XP_021114670.1  85/88 kDa calcium-independent phospholipase A2 isoform X5

    Conserved Domains (3) summary
    cd07212
    Location:279 → 592
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:84 → 191
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:85 → 113
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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