U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fam20b FAM20B glycosaminoglycan xylosylkinase [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101707016, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Fam20b
Gene description
FAM20B glycosaminoglycan xylosylkinase
Locus tag
GW7_01705
See related
Ensembl:ENSHGLG00000011049
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624771.1 (3305502..3345579, complement)

NW_004624771.1Genomic Context describing neighboring genes Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene torsin family 3 member A Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene angiopoietin like 1 Neighboring gene cullin-4B pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004624771 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphotransferase activity, alcohol group as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycosaminoglycan xylosylkinase
Names
Protein FAM20B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624771.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    3305502..3345579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021265360.1 → XP_021121019.1  glycosaminoglycan xylosylkinase isoform X2

    Conserved Domains (1) summary
    cd10470
    Location:188 → 374
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  2. XM_021265361.1 → XP_021121020.1  glycosaminoglycan xylosylkinase isoform X3

    Conserved Domains (1) summary
    cd10470
    Location:159 → 365
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  3. XM_004853367.3 → XP_004853424.1  glycosaminoglycan xylosylkinase isoform X1

    See identical proteins and their annotated locations for XP_004853424.1

    UniProtKB/TrEMBL
    G5C7J9
    Related
    ENSHGLP00000015451.1, ENSHGLT00000015611.1
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  4. XM_004853366.3 → XP_004853423.1  glycosaminoglycan xylosylkinase isoform X1

    See identical proteins and their annotated locations for XP_004853423.1

    UniProtKB/TrEMBL
    G5C7J9
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  5. XM_021265359.1 → XP_021121018.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    G5C7J9
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  6. XM_021265358.1 → XP_021121017.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    G5C7J9
    Related
    ENSHGLP00000015452.1, ENSHGLT00000015612.1
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.