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Atf7 activating transcription factor 7 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101699947, updated on 8-Mar-2024

Summary

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Gene symbol
Atf7
Gene description
activating transcription factor 7
See related
Ensembl:ENSHGLG00000001620
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Atf7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624904.1 (1604083..1705739, complement)

NW_004624904.1Genomic Context describing neighboring genes Neighboring gene poly(rC) binding protein 2 Neighboring gene mitogen-activated protein kinase kinase kinase 12 Neighboring gene uncharacterized LOC110347227 Neighboring gene TARBP2 subunit of RISC loading complex Neighboring gene neuropeptide FF-amide peptide precursor Neighboring gene uncharacterized LOC106008495 Neighboring gene ATP synthase membrane subunit c locus 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624904 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cAMP response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624904.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    1604083..1705739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004872752.2 → XP_004872809.1  cyclic AMP-dependent transcription factor ATF-7

    See identical proteins and their annotated locations for XP_004872809.1

    UniProtKB/TrEMBL
    G5BIF1
    Related
    ENSHGLP00000002135.1, ENSHGLT00000002183.1
    Conserved Domains (3) summary
    cd12192
    Location:47 → 84
    GCN4_cent; GCN4 central activation domain-like acidic activation domain
    cd14687
    Location:334 → 394
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
    sd00019
    Location:9 → 31
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_004872753.3 → XP_004872810.1  cyclic AMP-dependent transcription factor ATF-7

    See identical proteins and their annotated locations for XP_004872810.1

    UniProtKB/TrEMBL
    G5BIF1
    Conserved Domains (3) summary
    cd12192
    Location:47 → 84
    GCN4_cent; GCN4 central activation domain-like acidic activation domain
    cd14687
    Location:334 → 394
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
    sd00019
    Location:9 → 31
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. XR_001182827.2 RNA Sequence

  2. XR_206384.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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