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Ccdc138 coiled-coil domain containing 138 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101699665, updated on 8-Mar-2024

Summary

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Gene symbol
Ccdc138
Gene description
coiled-coil domain containing 138
See related
Ensembl:ENSHGLG00000017897
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (11924869..11974072)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene LIM zinc finger domain containing 1 Neighboring gene uncharacterized LOC106009377 Neighboring gene E3 SUMO-protein ligase RanBP2 Neighboring gene vomeronasal type-2 receptor 116-like Neighboring gene ectodysplasin A receptor Neighboring gene SH3 domain containing ring finger 3 Neighboring gene ligand-dependent nuclear receptor-interacting factor 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 138

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    11924869..11974072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004844519.2 → XP_004844576.1  coiled-coil domain-containing protein 138 isoform X1

    UniProtKB/TrEMBL
    G5CB93
    Related
    ENSHGLP00000025123.1, ENSHGLT00000025345.1
    Conserved Domains (1) summary
    pfam12718
    Location:215 → 322
    Tropomyosin_1; Tropomyosin like

  2. XM_021258157.1 → XP_021113816.1  coiled-coil domain-containing protein 138 isoform X5

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:167 → 353
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_013072089.2 → XP_012927543.1  coiled-coil domain-containing protein 138 isoform X4

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    pfam06156
    Location:180 → 264
    DUF972; Protein of unknown function (DUF972)

  4. XM_021258156.1 → XP_021113815.1  coiled-coil domain-containing protein 138 isoform X3

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:125 → 311
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_021258159.1 → XP_021113818.1  coiled-coil domain-containing protein 138 isoform X7

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:102 → 283
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_021258161.1 → XP_021113820.1  coiled-coil domain-containing protein 138 isoform X9

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:45 → 231
    SMC_N; RecF/RecN/SMC N terminal domain

  7. XM_021258160.1 → XP_021113819.1  coiled-coil domain-containing protein 138 isoform X8

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:90 → 276
    SMC_N; RecF/RecN/SMC N terminal domain

  8. XM_004844520.2 → XP_004844577.1  coiled-coil domain-containing protein 138 isoform X9

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:45 → 231
    SMC_N; RecF/RecN/SMC N terminal domain

  9. XM_021258162.1 → XP_021113821.1  coiled-coil domain-containing protein 138 isoform X9

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:45 → 231
    SMC_N; RecF/RecN/SMC N terminal domain

  10. XM_013072088.2 → XP_012927542.1  coiled-coil domain-containing protein 138 isoform X2

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    pfam12718
    Location:195 → 302
    Tropomyosin_1; Tropomyosin like

  11. XM_021258158.1 → XP_021113817.1  coiled-coil domain-containing protein 138 isoform X6

    UniProtKB/TrEMBL
    G5CB93
    Conserved Domains (1) summary
    cl25732
    Location:105 → 291
    SMC_N; RecF/RecN/SMC N terminal domain

  12. XM_021258163.1 → XP_021113822.1  coiled-coil domain-containing protein 138 isoform X10

RNA

  1. XR_002394803.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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