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Eif5b eukaryotic translation initiation factor 5B [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101699308, updated on 8-Mar-2024

Summary

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Gene symbol
Eif5b
Gene description
eukaryotic translation initiation factor 5B
See related
Ensembl:ENSHGLG00000016367
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Eif5b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (4297832..4373918)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein RP/EB family member 1 pseudogene Neighboring gene thioredoxin domain containing 9 Neighboring gene REV1 DNA directed polymerase Neighboring gene ALF transcription elongation factor 3 Neighboring gene la-related protein 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    4297832..4373918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021258080.1 → XP_021113739.1  eukaryotic translation initiation factor 5B isoform X1

    UniProtKB/TrEMBL
    G5BMS4
    Conserved Domains (1) summary
    cl26407
    Location:630 → 1206
    IF-2; Translation-initiation factor 2

  2. XM_004844429.3 → XP_004844486.1  eukaryotic translation initiation factor 5B isoform X2

    UniProtKB/TrEMBL
    G5BMS4
    Related
    ENSHGLP00000022947.1, ENSHGLT00000023161.1
    Conserved Domains (5) summary
    cd01887
    Location:627 → 840
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:621 → 1197
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:961 → 1062
    IF-2; Translation-initiation factor 2
    cd03703
    Location:850 → 960
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cd16266
    Location:1087 → 1181
    IF2_aeIF5B_IV; Domain IV of prokaryotic Initiation Factor 2 and archaeal and eukaryotic Initiation Factor 5
Nucleotide Protein
Heading Accession and Version

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