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RIN3 Ras and Rab interactor 3 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101693792, updated on 8-Mar-2024

Summary

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Gene symbol
RIN3
Gene description
Ras and Rab interactor 3
See related
Ensembl:ENSMPUG00000007511
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421290.1 (23086357..23202194, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569144.1 (22727883..22843364, complement)

NW_025421290.1Genomic Context describing neighboring genes Neighboring gene ragulator complex protein LAMTOR1-like Neighboring gene legumain Neighboring gene solute carrier family 24 member 4 Neighboring gene cleavage and polyadenylation specific factor 2 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras and Rab interactor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421290.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    23086357..23202194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045071081.1 → XP_044927016.1  ras and Rab interactor 3 isoform X2

    UniProtKB/TrEMBL
    A0A8U0RPI6, M3Y7Z8
    Conserved Domains (4) summary
    PHA03307
    Location:341 → 566
    PHA03307; transcriptional regulator ICP4; Provisional
    cd16130
    Location:856 → 943
    RA_Rin3; Ras-associating (RA) domain found in Ras and Rab interactor 3 (Rin3)
    cl19569
    Location:762 → 821
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl15255
    Location:53 → 154
    SH2; Src homology 2 (SH2) domain

  2. XM_004739334.3 → XP_004739391.1  ras and Rab interactor 3 isoform X1

    UniProtKB/TrEMBL
    A0A8U0SPF1, M3Y7Z8
    Related
    ENSMPUP00000007455.1
    Conserved Domains (4) summary
    TIGR03483
    Location:341 → 434
    FtsZ_alphas_C; cell division protein FtsZ, alphaProteobacterial C-terminal extension
    pfam02204
    Location:763 → 865
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl00155
    Location:905 → 984
    UBQ; Ubiquitin-like proteins
    cl15255
    Location:53 → 154
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
Heading Accession and Version

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