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YTHDF1 YTH N6-methyladenosine RNA binding protein F1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101686771, updated on 8-Mar-2024

Summary

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Gene symbol
YTHDF1
Gene description
YTH N6-methyladenosine RNA binding protein F1
See related
Ensembl:ENSMPUG00000008111
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See YTHDF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422115.1 (25853978..25865302, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569216.1 (8134015..8143969, complement)

NW_025422115.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123389320 Neighboring gene basic helix-loop-helix family member e23 Neighboring gene baculoviral IAP repeat containing 7 Neighboring gene ARF GTPase activating protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N6-methyladenosine-containing RNA reader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA destabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
YTH domain-containing family protein 1
Names
YTH N6-methyladenosine RNA binding protein 1
YTH domain family, member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422115.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    25853978..25865302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045070489.1 → XP_044926424.1  YTH domain-containing family protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8U0UTI9

  2. XM_045070488.1 → XP_044926423.1  YTH domain-containing family protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RK96

  3. XM_045070490.1 → XP_044926425.1  YTH domain-containing family protein 1 isoform X3

    UniProtKB/TrEMBL
    M3Y9P7
    Conserved Domains (1) summary
    pfam04146
    Location:338 → 471
    YTH; YT521-B-like domain
Nucleotide Protein
Heading Accession and Version

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