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TAF15 TATA-box binding protein associated factor 15 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101673053, updated on 8-Mar-2024

Summary

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Gene symbol
TAF15
Gene description
TATA-box binding protein associated factor 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422106.1 (16023350..16052063, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569161.1 (9191407..9220104)

NW_025422106.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106005319 Neighboring gene C-C motif chemokine ligand 5 Neighboring gene HEAT repeat containing 9 Neighboring gene matrix metallopeptidase 28 Neighboring gene chromosome unknown C17orf50 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TATA-binding protein-associated factor 2N

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422106.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    16023350..16052063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045069978.1 → XP_044925913.1  TATA-binding protein-associated factor 2N isoform X2

    UniProtKB/TrEMBL
    A0A8U0RJA4
    Conserved Domains (4) summary
    PTZ00395
    Location:27 → 143
    PTZ00395; Sec24-related protein; Provisional
    smart00547
    Location:321 → 347
    ZnF_RBZ; Zinc finger domain
    cd12534
    Location:201 → 283
    RRM_SARFH; RNA recognition motif (RRM) found in Drosophila melanogaster RNA-binding protein cabeza and similar proteins
    sd00025
    Location:323 → 344
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. XM_004747136.3 → XP_004747193.1  TATA-binding protein-associated factor 2N isoform X1

    UniProtKB/TrEMBL
    A0A8U0MLV3
    Conserved Domains (4) summary
    PTZ00395
    Location:27 → 293
    PTZ00395; Sec24-related protein; Provisional
    sd00025
    Location:356 → 377
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:352 → 382
    zf-RanBP; Zn-finger in Ran binding protein and others
    cd12535
    Location:230 → 315
    RRM_FUS_TAF15; RNA recognition motif (RRM) found in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
Nucleotide Protein
Heading Accession and Version

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