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ATP9B ATPase phospholipid transporting 9B (putative) [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101662944, updated on 8-Mar-2024

Summary

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Gene symbol
ATP9B
Gene description
ATPase phospholipid transporting 9B (putative)
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111300.1 (61697189..61815435)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558811.1 (3356220..3463396)

NW_022111300.1Genomic Context describing neighboring genes Neighboring gene galanin receptor 1 Neighboring gene spalt like transcription factor 3 Neighboring gene nuclear factor of activated T cells 1 Neighboring gene CTD phosphatase subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IIB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022111300.1 Reference ASM31398v2 Primary Assembly

    Range
    61697189..61815435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004715925.2 → XP_004715982.2  probable phospholipid-transporting ATPase IIB isoform X1

  2. XM_013008096.2 → XP_012863550.2  probable phospholipid-transporting ATPase IIB isoform X2

  3. XM_045296271.1 → XP_045152206.1  probable phospholipid-transporting ATPase IIB isoform X4

  4. XM_045296270.1 → XP_045152205.1  probable phospholipid-transporting ATPase IIB isoform X3

  5. XM_045296272.1 → XP_045152207.1  probable phospholipid-transporting ATPase IIB isoform X5

  6. XM_045296273.1 → XP_045152208.1  probable phospholipid-transporting ATPase IIB isoform X6

RNA

  1. XR_006680662.1 RNA Sequence

  2. XR_006680663.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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