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UBOX5 U-box domain containing 5 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101659253, updated on 8-Mar-2024

Summary

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Gene symbol
UBOX5
Gene description
U-box domain containing 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022109491.1 (28759572..28798994, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558704.1 (20488836..20500876)

NW_022109491.1Genomic Context describing neighboring genes Neighboring gene neurophysin 2-like Neighboring gene neurophysin 2-like Neighboring gene FAST kinase domains 5 Neighboring gene leucine zipper tumor suppressor family member 3 Neighboring gene DDRGK domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-ubiquitin ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 37

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022109491.1 Reference ASM31398v2 Primary Assembly

    Range
    28759572..28798994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045295234.1 → XP_045151169.1  RING finger protein 37 isoform X1

    Conserved Domains (2) summary
    cd16537
    Location:485 → 531
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:263 → 315
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  2. XM_045295232.1 → XP_045151167.1  RING finger protein 37 isoform X1

    Conserved Domains (2) summary
    cd16537
    Location:485 → 531
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:263 → 315
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  3. XM_045295233.1 → XP_045151168.1  RING finger protein 37 isoform X1

    Conserved Domains (2) summary
    cd16537
    Location:485 → 531
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:263 → 315
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  4. XM_004697871.2 → XP_004697928.1  RING finger protein 37 isoform X4

    Conserved Domains (2) summary
    cd16537
    Location:431 → 477
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:263 → 315
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  5. XM_045295236.1 → XP_045151171.1  RING finger protein 37 isoform X2

  6. XM_004697869.2 → XP_004697926.1  RING finger protein 37 isoform X1

    Conserved Domains (2) summary
    cd16537
    Location:485 → 531
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:263 → 315
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  7. XM_045295237.1 → XP_045151172.1  RING finger protein 37 isoform X3

Nucleotide Protein
Heading Accession and Version

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