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CENPB centromere protein B [ Condylura cristata (star-nosed mole) ]

Gene ID: 101635545, updated on 8-Mar-2024

Summary

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Gene symbol
CENPB
Gene description
centromere protein B
Gene type
protein coding
RefSeq status
MODEL
Organism
Condylura cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567123.1 (23168017..23170654, complement)

NW_004567123.1Genomic Context describing neighboring genes Neighboring gene adipose secreted signaling protein Neighboring gene sperm flagellar 1 Neighboring gene cell division cycle 25B Neighboring gene adaptor related protein complex 5 subunit sigma 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004567123.1 Unplaced Scaffold Reference ConCri1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome, centromeric region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major centromere autoantigen B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ConCri1.0

Genomic

  1. NW_004567123.1 Reference ConCri1.0

    Range
    23168017..23170654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004687007.2 → XP_004687064.1  major centromere autoantigen B

    Conserved Domains (4) summary
    smart00674
    Location:70 → 131
    CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
    pfam04218
    Location:1 → 52
    CENP-B_N; CENP-B N-terminal DNA-binding domain
    pfam09026
    Location:543 → 602
    CENP-B_dimeris; Centromere protein B dimerization domain
    cl21549
    Location:218 → 380
    rve; Integrase core domain
Nucleotide Protein
Heading Accession and Version

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