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Cd44 CD44 molecule (IN blood group) [ Octodon degus (degu) ]

Gene ID: 101572613, updated on 8-Mar-2024

Summary

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Gene symbol
Cd44
Gene description
CD44 molecule (IN blood group)
See related
Ensembl:ENSODEG00000016446
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524594.1 (13345897..13435274, complement)

NW_004524594.1Genomic Context describing neighboring genes Neighboring gene peptidase domain containing associated with muscle regeneration 1 Neighboring gene solute carrier family 1 member 2 Neighboring gene proteasome subunit alpha type-5 pseudogene Neighboring gene probable ATP-dependent RNA helicase DDX41 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524594 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of macrophage migration inhibitory factor receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD44 antigen
Names
CD44 molecule (Indian blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524594.1 Reference OctDeg1.0 Primary Assembly

    Range
    13345897..13435274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023710552.1 → XP_023566320.1  CD44 antigen isoform X14

    UniProtKB/TrEMBL
    A0A6P6E207
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  2. XM_023710540.1 → XP_023566308.1  CD44 antigen isoform X2

    UniProtKB/TrEMBL
    A0A6P6E2V2
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  3. XM_023710541.1 → XP_023566309.1  CD44 antigen isoform X3

    UniProtKB/TrEMBL
    A0A6P6E1Z9
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  4. XM_023710539.1 → XP_023566307.1  CD44 antigen isoform X1

    UniProtKB/TrEMBL
    A0A6P6E280
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  5. XM_023710542.1 → XP_023566310.1  CD44 antigen isoform X4

    UniProtKB/TrEMBL
    A0A6P6E1Z7
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  6. XM_023710544.1 → XP_023566312.1  CD44 antigen isoform X6

    UniProtKB/TrEMBL
    A0A6P6E285
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  7. XM_023710543.1 → XP_023566311.1  CD44 antigen isoform X5

    UniProtKB/TrEMBL
    A0A6P6E233
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  8. XM_023710545.1 → XP_023566313.1  CD44 antigen isoform X7

    UniProtKB/TrEMBL
    A0A6P6E2V7
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  9. XM_023710547.1 → XP_023566315.1  CD44 antigen isoform X9

    UniProtKB/TrEMBL
    A0A6P6E202
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  10. XM_023710548.1 → XP_023566316.1  CD44 antigen isoform X10

    UniProtKB/TrEMBL
    A0A6P6E236
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  11. XM_023710546.1 → XP_023566314.1  CD44 antigen isoform X8

    UniProtKB/TrEMBL
    A0A6P6E203
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  12. XM_023710549.1 → XP_023566317.1  CD44 antigen isoform X11

    UniProtKB/TrEMBL
    A0A6P6E290
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  13. XM_023710550.1 → XP_023566318.1  CD44 antigen isoform X12

    UniProtKB/TrEMBL
    A0A6P6E2W3
    Related
    ENSODEP00000022403.1, ENSODET00000022664.1
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  14. XM_023710551.1 → XP_023566319.1  CD44 antigen isoform X13

    UniProtKB/TrEMBL
    A0A6P6E208
    Related
    ENSODEP00000022404.1, ENSODET00000022665.1
    Conserved Domains (1) summary
    cd03516
    Location:27 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...
Nucleotide Protein
Heading Accession and Version

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