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Sipa1l2 signal induced proliferation associated 1 like 2 [ Octodon degus (degu) ]

Gene ID: 101571523, updated on 8-Mar-2024

Summary

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Gene symbol
Sipa1l2
Gene description
signal induced proliferation associated 1 like 2
See related
Ensembl:ENSODEG00000005861
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524703.1 (2474040..2653715, complement)

NW_004524703.1Genomic Context describing neighboring genes Neighboring gene BAG family molecular chaperone regulator 5-like Neighboring gene DISC1 scaffold protein Neighboring gene immunoglobulin-binding protein 1 pseudogene Neighboring gene uncharacterized LOC111812522 Neighboring gene microtubule associated protein 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524703 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal-induced proliferation-associated 1-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524703.1 Reference OctDeg1.0 Primary Assembly

    Range
    2474040..2653715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023700841.1 → XP_023556609.1  signal-induced proliferation-associated 1-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P6D930
    Conserved Domains (4) summary
    cd00992
    Location:952 → 1024
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam02145
    Location:627 → 807
    Rap_GAP; Rap/ran-GAP
    pfam11881
    Location:1423 → 1661
    SPAR_C; C-terminal domain of SPAR protein
    pfam15742
    Location:1643 → 1707
    DUF4686; Domain of unknown function (DUF4686)

  2. XM_004640829.2 → XP_004640886.1  signal-induced proliferation-associated 1-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P3F8I1
    Related
    ENSODEP00000007862.1, ENSODET00000007982.1
    Conserved Domains (3) summary
    cd00992
    Location:952 → 1024
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam02145
    Location:627 → 807
    Rap_GAP; Rap/ran-GAP
    pfam11881
    Location:1423 → 1666
    SPAR_C; C-terminal domain of SPAR protein

  3. XM_023700839.1 → XP_023556607.1  signal-induced proliferation-associated 1-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P6DAD5
    Conserved Domains (4) summary
    cd00992
    Location:952 → 1024
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam02145
    Location:627 → 807
    Rap_GAP; Rap/ran-GAP
    pfam11881
    Location:1423 → 1679
    SPAR_C; C-terminal domain of SPAR protein
    pfam15742
    Location:1661 → 1725
    DUF4686; Domain of unknown function (DUF4686)

  4. XM_023700840.1 → XP_023556608.1  signal-induced proliferation-associated 1-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P6DAD5
    Conserved Domains (4) summary
    cd00992
    Location:952 → 1024
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam02145
    Location:627 → 807
    Rap_GAP; Rap/ran-GAP
    pfam11881
    Location:1423 → 1679
    SPAR_C; C-terminal domain of SPAR protein
    pfam15742
    Location:1661 → 1725
    DUF4686; Domain of unknown function (DUF4686)

  5. XM_023700842.1 → XP_023556610.1  signal-induced proliferation-associated 1-like protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P6D9Q2
    Related
    ENSODEP00000007863.1, ENSODET00000007983.1
    Conserved Domains (4) summary
    cd00992
    Location:952 → 1024
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam02145
    Location:627 → 807
    Rap_GAP; Rap/ran-GAP
    pfam11881
    Location:1423 → 1648
    SPAR_C; C-terminal domain of SPAR protein
    pfam15742
    Location:1630 → 1694
    DUF4686; Domain of unknown function (DUF4686)
Nucleotide Protein
Heading Accession and Version

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