U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ctif cap binding complex dependent translation initiation factor [ Octodon degus (degu) ]

Gene ID: 101571501, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Ctif
Gene description
cap binding complex dependent translation initiation factor
See related
Ensembl:ENSODEG00000018390
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524579.1 (25382917..25698193)

NW_004524579.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene SMAD family member 2 Neighboring gene zinc finger and BTB domain containing 7C Neighboring gene 39S ribosomal protein L42, mitochondrial pseudogene Neighboring gene SMAD family member 7

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004524579 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CBP80/20-dependent translation initiation factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524579.1 Reference OctDeg1.0 Primary Assembly

    Range
    25382917..25698193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023714714.1 → XP_023570482.1  CBP80/20-dependent translation initiation factor isoform X1

    UniProtKB/TrEMBL
    A0A6P6EEI3
    Conserved Domains (2) summary
    pfam02854
    Location:379 → 580
    MIF4G; MIF4G domain
    cl25751
    Location:185 → 348
    DUF4045; Domain of unknown function (DUF4045)

  2. XM_023714712.1 → XP_023570480.1  CBP80/20-dependent translation initiation factor isoform X1

    UniProtKB/TrEMBL
    A0A6P6EEI3
    Conserved Domains (2) summary
    pfam02854
    Location:379 → 580
    MIF4G; MIF4G domain
    cl25751
    Location:185 → 348
    DUF4045; Domain of unknown function (DUF4045)

  3. XM_023714720.1 → XP_023570488.1  CBP80/20-dependent translation initiation factor isoform X1

    UniProtKB/TrEMBL
    A0A6P6EEI3
    Related
    ENSODEP00000025126.1, ENSODET00000025404.1
    Conserved Domains (2) summary
    pfam02854
    Location:379 → 580
    MIF4G; MIF4G domain
    cl25751
    Location:185 → 348
    DUF4045; Domain of unknown function (DUF4045)

  4. XM_004623636.2 → XP_004623693.1  CBP80/20-dependent translation initiation factor isoform X2

    UniProtKB/TrEMBL
    A0A6P3EU99
    Conserved Domains (1) summary
    pfam02854
    Location:377 → 578
    MIF4G; MIF4G domain

  5. XM_023714728.1 → XP_023570496.1  CBP80/20-dependent translation initiation factor isoform X3

    UniProtKB/TrEMBL
    A0A6P6EDX4
    Conserved Domains (2) summary
    pfam02854
    Location:355 → 556
    MIF4G; MIF4G domain
    cl25751
    Location:161 → 324
    DUF4045; Domain of unknown function (DUF4045)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.