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Henmt1 HEN methyltransferase 1 [ Octodon degus (degu) ]

Gene ID: 101568980, updated on 8-Mar-2024

Summary

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Gene symbol
Henmt1
Gene description
HEN methyltransferase 1
See related
Ensembl:ENSODEG00000005071
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524660.1 (3077874..3095170)

NW_004524660.1Genomic Context describing neighboring genes Neighboring gene pre-mRNA processing factor 38B Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene EEIG family member 2 Neighboring gene small nucleolar RNA U13 Neighboring gene phosphoglycerate mutase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524660 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in siRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small RNA 2'-O-methyltransferase
Names
HEN1 methyltransferase homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524660.1 Reference OctDeg1.0 Primary Assembly

    Range
    3077874..3095170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023721698.1 → XP_023577466.1  small RNA 2'-O-methyltransferase

    UniProtKB/TrEMBL
    A0A6P6EYS7
    Related
    ENSODEP00000006778.1, ENSODET00000006884.1
    Conserved Domains (1) summary
    cl25638
    Location:29 → 232
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1
Nucleotide Protein
Heading Accession and Version

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