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Gcnt1 glucosaminyl (N-acetyl) transferase 1 [ Octodon degus (degu) ]

Gene ID: 101561292, updated on 8-Mar-2024

Summary

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Gene symbol
Gcnt1
Gene description
glucosaminyl (N-acetyl) transferase 1
See related
Ensembl:ENSODEG00000018998
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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See Gcnt1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524671.1 (6780064..6807987, complement)

NW_004524671.1Genomic Context describing neighboring genes Neighboring gene prune homolog 2 with BCH domain Neighboring gene small nucleolar RNA SNORA11 Neighboring gene 28S ribosomal protein S18c, mitochondrial-like Neighboring gene poly(rC)-binding protein 1-like Neighboring gene riboflavin kinase Neighboring gene proprotein convertase subtilisin/kexin type 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524671 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
glucosaminyl (N-acetyl) transferase 1, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524671.1 Reference OctDeg1.0 Primary Assembly

    Range
    6780064..6807987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004638120.2 → XP_004638177.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A6P6F250
    Related
    ENSODEP00000025703.1, ENSODET00000026063.1
    Conserved Domains (1) summary
    pfam02485
    Location:123 → 391
    Branch; Core-2/I-Branching enzyme

  2. XM_023722957.1 → XP_023578725.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A6P6F250
    Conserved Domains (1) summary
    pfam02485
    Location:123 → 391
    Branch; Core-2/I-Branching enzyme

  3. XM_023722958.1 → XP_023578726.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A6P6F250
    Conserved Domains (1) summary
    pfam02485
    Location:123 → 391
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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