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CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Sorex araneus (European shrew) ]

Gene ID: 101551713, updated on 8-Mar-2024

Summary

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Gene symbol
CSGALNACT1
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 1
See related
EnsemblRapid:ENSSARG00000004367
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See CSGALNACT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 1 NC_073302.1 (332951132..333366971, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004546054.1 (977298..1060909, complement)

Chromosome 1 - NC_073302.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene SH2 domain containing 4A Neighboring gene integrator complex subunit 10 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene heparan-alpha-glucosaminide N-acetyltransferase Neighboring gene protein O-mannose kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073302.1 Reference mSorAra2.pri

    Range
    332951132..333366971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055120424.1 → XP_054976399.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  2. XM_055120430.1 → XP_054976405.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  3. XM_055120445.1 → XP_054976420.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  4. XM_055120414.1 → XP_054976389.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  5. XM_055120437.1 → XP_054976412.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  6. XM_055120405.1 → XP_054976380.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  7. XM_055120452.1 → XP_054976427.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Related
    ENSSARP00000003983.1, ENSSART00000004383.2
Nucleotide Protein
Heading Accession and Version

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