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PHTF2 putative homeodomain transcription factor 2 [ Sorex araneus (European shrew) ]

Gene ID: 101545116, updated on 8-Mar-2024

Summary

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Gene symbol
PHTF2
Gene description
putative homeodomain transcription factor 2
See related
EnsemblRapid:ENSSARG00000009974
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 1 NC_073302.1 (401689495..401801230, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545860.1 (20316846..20425726)

Chromosome 1 - NC_073302.1Genomic Context describing neighboring genes Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 2 Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 60 Neighboring gene round spermatid basic protein 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein PHTF2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073302.1 Reference mSorAra2.pri

    Range
    401689495..401801230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055141105.1 → XP_054997080.1  protein PHTF2 isoform X2

    Related
    ENSSARP00000013837.1, ENSSART00000020400.1

  2. XM_055141111.1 → XP_054997086.1  protein PHTF2 isoform X3

    Related
    ENSSARP00000037032.1, ENSSART00000027494.1

  3. XM_055141088.1 → XP_054997063.1  protein PHTF2 isoform X1

    Related
    ENSSARP00000009034.2, ENSSART00000009989.2

  4. XM_055141096.1 → XP_054997071.1  protein PHTF2 isoform X1

  5. XM_055141119.1 → XP_054997094.1  protein PHTF2 isoform X4

Nucleotide Protein
Heading Accession and Version

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