U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GRIA4 glutamate ionotropic receptor AMPA type subunit 4 [ Sorex araneus (European shrew) ]

Gene ID: 101543100, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GRIA4
Gene description
glutamate ionotropic receptor AMPA type subunit 4
See related
EnsemblRapid:ENSSARG00000005683
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 3 NC_073304.1 (176812908..177147081, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545869.1 (12764266..13088190, complement)

Chromosome 3 - NC_073304.1Genomic Context describing neighboring genes Neighboring gene kelch repeat and BTB domain containing 3 Neighboring gene Myb/SANT DNA binding domain containing 4 with coiled-coils Neighboring gene U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like Neighboring gene caspase-12-like Neighboring gene platelet derived growth factor D Neighboring gene DNA damage inducible 1 homolog 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMPA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glutamate receptor 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073304.1 Reference mSorAra2.pri

    Range
    176812908..177147081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004604799.2 → XP_004604856.1  glutamate receptor 4 isoform X5

    Related
    ENSSARP00000028938.1, ENSSART00000029837.1
    Conserved Domains (4) summary
    cd06388
    Location:28 → 398
    PBP1_iGluR_AMPA_GluR4; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR4 subunit of the AMPA receptor
    cd13727
    Location:414 → 795
    PBP2_iGluR_AMPA_GluR4; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR4 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam00060
    Location:546 → 825
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:39 → 380
    ANF_receptor; Receptor family ligand binding region

  2. XM_004604801.2 → XP_004604858.1  glutamate receptor 4 isoform X1

    Related
    ENSSARP00000005164.2, ENSSART00000005696.2
    Conserved Domains (4) summary
    cd06388
    Location:28 → 398
    PBP1_iGluR_AMPA_GluR4; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR4 subunit of the AMPA receptor
    cd13727
    Location:414 → 795
    PBP2_iGluR_AMPA_GluR4; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR4 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam00060
    Location:546 → 825
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:39 → 380
    ANF_receptor; Receptor family ligand binding region

  3. XM_055130905.1 → XP_054986880.1  glutamate receptor 4 isoform X4

  4. XM_055130904.1 → XP_054986879.1  glutamate receptor 4 isoform X3

  5. XM_055130903.1 → XP_054986878.1  glutamate receptor 4 isoform X2

  6. XM_055130906.1 → XP_054986881.1  glutamate receptor 4 isoform X6

  7. XM_004604802.2 → XP_004604859.1  glutamate receptor 4 isoform X7

    Related
    ENSSARP00000033714.1, ENSSART00000030358.1
    Conserved Domains (2) summary
    cd06388
    Location:28 → 398
    PBP1_iGluR_AMPA_GluR4; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR4 subunit of the AMPA receptor
    pfam01094
    Location:39 → 380
    ANF_receptor; Receptor family ligand binding region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.