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CSRNP3 cysteine and serine rich nuclear protein 3 [ Ochotona princeps (American pika) ]

Gene ID: 101519086, updated on 8-Mar-2024

Summary

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Gene symbol
CSRNP3
Gene description
cysteine and serine rich nuclear protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 5 NC_080836.1 (46310318..46409018)
102 previous assembly OchPri4.0 (GCF_014633375.1) 7 NC_050542.1 (51729095..51896941)

Chromosome 5 - NC_080836.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel alpha subunit 2 Neighboring gene protein HEXIM2-like Neighboring gene uncharacterized LOC131480374 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 3 Neighboring gene tetratricopeptide repeat domain 21B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine/serine-rich nuclear protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080836.1 Reference mOchPri1.hap1

    Range
    46310318..46409018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004577103.2 → XP_004577160.1  cysteine/serine-rich nuclear protein 3

    See identical proteins and their annotated locations for XP_004577160.1

    Conserved Domains (1) summary
    pfam16019
    Location:63 → 277
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

  2. XM_004577104.3 → XP_004577161.1  cysteine/serine-rich nuclear protein 3

    See identical proteins and their annotated locations for XP_004577161.1

    Conserved Domains (1) summary
    pfam16019
    Location:63 → 277
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus
Nucleotide Protein
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