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RBM23 RNA binding motif protein 23 [ Ochotona princeps (American pika) ]

Gene ID: 101517146, updated on 8-Mar-2024

Summary

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Gene symbol
RBM23
Gene description
RNA binding motif protein 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human all
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Genomic context

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Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 6 NC_080837.1 (46851033..46863764, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 17 NC_050552.1 (44321309..44328342)

Chromosome 6 - NC_080837.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 10 Neighboring gene RRAD and GEM like GTPase 2 Neighboring gene protein arginine methyltransferase 5 Neighboring gene transfer RNA arginine (anticodon ACG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable RNA-binding protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080837.1 Reference mOchPri1.hap1

    Range
    46851033..46863764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058666203.1 → XP_058522186.1  probable RNA-binding protein 23 isoform X3

  2. XM_058666201.1 → XP_058522184.1  probable RNA-binding protein 23 isoform X1

  3. XM_004584678.3 → XP_004584735.1  probable RNA-binding protein 23 isoform X4

    Conserved Domains (3) summary
    cd12284
    Location:265 → 337
    RRM2_RBM23_RBM39; RNA recognition motif 2 in vertebrate RNA-binding protein RBM23, RBM39 and similar proteins
    cd12537
    Location:165 → 249
    RRM1_RBM23; RNA recognition motif 1 in vertebrate probable RNA-binding protein 23 (RBM23)
    pfam15519
    Location:358 → 441
    RBM39linker; linker between RRM2 and RRM3 domains in RBM39 protein

  4. XM_058666202.1 → XP_058522185.1  probable RNA-binding protein 23 isoform X2

Nucleotide Protein
Heading Accession and Version

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