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zfand4 zinc finger, AN1-type domain 4 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101483775, updated on 8-Mar-2024

Summary

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Gene symbol
zfand4
Gene description
zinc finger, AN1-type domain 4
See related
Ensembl:ENSMZEG00005027704
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See zfand4 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
12
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG13 NC_036792.1 (16342183..16357333, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531737.1 (6373558..6387351, complement)

Linkage Group LG13 - NC_036792.1Genomic Context describing neighboring genes Neighboring gene arachidonate 5-lipoxygenase a Neighboring gene membrane-associated ring finger (C3HC4) 8 Neighboring gene WASH complex subunit 2C Neighboring gene SMC5-SMC6 complex localization factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AN1-type zinc finger protein 4
Names
zinc finger AN1-type containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036792.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    16342183..16357333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012919230.3 → XP_012774684.1  AN1-type zinc finger protein 4

    See identical proteins and their annotated locations for XP_012774684.1

    UniProtKB/TrEMBL
    A0A3P9DRV8
    Related
    ENSMZEP00005037179.1, ENSMZET00005038480.1
    Conserved Domains (3) summary
    cd01802
    Location:1 → 103
    AN1_N; ubiquitin-like domain of AN1
    smart00154
    Location:673 → 711
    ZnF_AN1; AN1-like Zinc finger
    cl26464
    Location:219 → 513
    Atrophin-1; Atrophin-1 family

  2. XM_004551748.4 → XP_004551805.1  AN1-type zinc finger protein 4

    See identical proteins and their annotated locations for XP_004551805.1

    UniProtKB/TrEMBL
    A0A3P9DRV8
    Conserved Domains (3) summary
    cd01802
    Location:1 → 103
    AN1_N; ubiquitin-like domain of AN1
    smart00154
    Location:673 → 711
    ZnF_AN1; AN1-like Zinc finger
    cl26464
    Location:219 → 513
    Atrophin-1; Atrophin-1 family

RNA

  1. XR_001167568.3 RNA Sequence

  2. XR_001167569.3 RNA Sequence

  3. XR_001167567.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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