U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

vps9d1 VPS9 domain containing 1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101481261, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
vps9d1
Gene description
VPS9 domain containing 1
See related
Ensembl:ENSMZEG00005000331
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG7
Exon count:
17
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG7 NC_036786.1 (63093161..63121421)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531972.1 (289329..317615)

Linkage Group LG7 - NC_036786.1Genomic Context describing neighboring genes Neighboring gene coactosin-like F-actin binding protein 1 Neighboring gene kelch-like family member 36 Neighboring gene uncharacterized LOC101480675 Neighboring gene uncharacterized LOC101481927 Neighboring gene spermatogenesis associated 2-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
VPS9 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036786.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    63093161..63121421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004573897.4 → XP_004573954.1  VPS9 domain-containing protein 1

    UniProtKB/TrEMBL
    A0A3P9ARI9
    Related
    ENSMZEP00005000295.1, ENSMZET00005000352.1
    Conserved Domains (1) summary
    pfam02204
    Location:573 → 685
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.