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cacul1 CDK2 associated cullin domain 1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101480123, updated on 8-Mar-2024

Summary

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Gene symbol
cacul1
Gene description
CDK2 associated cullin domain 1
See related
Ensembl:ENSMZEG00005011188
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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See cacul1 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
8
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG13 NC_036792.1 (24338193..24342433)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531773.1 (457472..460192, complement)

Linkage Group LG13 - NC_036792.1Genomic Context describing neighboring genes Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 12 Neighboring gene sirtuin 1 Neighboring gene myopalladin Neighboring gene atonal bHLH transcription factor 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CDK2-associated and cullin domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036792.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    24338193..24342433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004559648.5 → XP_004559705.1  CDK2-associated and cullin domain-containing protein 1

    UniProtKB/TrEMBL
    A0A3P9BZ13
    Related
    ENSMZEP00005014866.1, ENSMZET00005015354.1
    Conserved Domains (1) summary
    pfam00888
    Location:122 → 278
    Cullin; Cullin family
Nucleotide Protein
Heading Accession and Version

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