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stx7l syntaxin 7-like [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101466674, updated on 8-Mar-2024

Summary

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Gene symbol
stx7l
Gene description
syntaxin 7-like
See related
Ensembl:ENSMZEG00005012980
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
stx7
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG15
Exon count:
10
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG15 NC_036794.1 (5727795..5734406, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531716.1 (5876556..5881916, complement)

Linkage Group LG15 - NC_036794.1Genomic Context describing neighboring genes Neighboring gene chromogranin A Neighboring gene cellular communication network factor 2a Neighboring gene linkage group 15 C6orf58 homolog Neighboring gene double PHD fingers 3 Neighboring gene uncharacterized LOC112436044

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036794.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    5727795..5734406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004542059.3 → XP_004542116.1  syntaxin-7 isoform X2

    See identical proteins and their annotated locations for XP_004542116.1

    Conserved Domains (2) summary
    cd15875
    Location:163 → 222
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 118
    Syntaxin_2; Syntaxin-like protein

  2. XM_004542058.3 → XP_004542115.1  syntaxin-7 isoform X1

    See identical proteins and their annotated locations for XP_004542115.1

    UniProtKB/TrEMBL
    A0A3P9C4R0
    Related
    ENSMZEP00005017268.1, ENSMZET00005017815.1
    Conserved Domains (2) summary
    cd15875
    Location:164 → 223
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 118
    Syntaxin_2; Syntaxin-like protein
Nucleotide Protein
Heading Accession and Version

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