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dcn decorin [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101466608, updated on 8-Mar-2024

Summary

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Gene symbol
dcn
Gene description
decorin
See related
Ensembl:ENSMZEG00005005461
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG17
Exon count:
8
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG17 NC_036796.1 (22396803..22419524, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531728.1 (3967306..3990636)

Linkage Group LG17 - NC_036796.1Genomic Context describing neighboring genes Neighboring gene keratocan Neighboring gene lumican Neighboring gene asporin-like Neighboring gene B-cell translocation gene 1, anti-proliferative

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
decorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036796.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    22396803..22419524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004548310.5 → XP_004548367.1  decorin

    See identical proteins and their annotated locations for XP_004548367.1

    UniProtKB/TrEMBL
    A0A3P9BBE5
    Related
    ENSMZEP00005007106.1, ENSMZET00005007414.1
    Conserved Domains (3) summary
    sd00033
    Location:59 → 79
    LRR_RI; leucine-rich repeat [structural motif]
    pfam01462
    Location:51 → 77
    LRRNT; Leucine rich repeat N-terminal domain
    cl26018
    Location:67 → 295
    NEL; C-terminal novel E3 ligase, LRR-interacting
Nucleotide Protein
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