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TCEA1 transcription elongation factor A1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101440443, updated on 8-Mar-2024

Summary

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Gene symbol
TCEA1
Gene description
transcription elongation factor A1
See related
Ensembl:ENSDNOG00000035288
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 14 NC_080686.1 (16804139..16838862, complement)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004496233.1 (2270585..2304489, complement)

Chromosome 14 - NC_080686.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V1 subunit H Neighboring gene regulator of G protein signaling 20 Neighboring gene lysophospholipase 1 Neighboring gene mitochondrial ribosomal protein L15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor A protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080686.1 Reference mDasNov1.hap2

    Range
    16804139..16838862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004479851.4 → XP_004479908.1  transcription elongation factor A protein 1 isoform X1

    Related
    ENSDNOP00000032983.1
    Conserved Domains (4) summary
    cd00183
    Location:2 → 78
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
    cd13749
    Location:254 → 300
    Zn-ribbon_TFIIS; domain III/zinc ribbon domain of Transcription Factor IIS
    TIGR01385
    Location:3 → 301
    TFSII; transcription elongation factor S-II
    pfam07500
    Location:138 → 245
    TFIIS_M; Transcription factor S-II (TFIIS), central domain

  2. XM_058275533.1 → XP_058131516.1  transcription elongation factor A protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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