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PLOD1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101425716, updated on 8-Mar-2024

Summary

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Gene symbol
PLOD1
Gene description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
See related
Ensembl:ENSDNOG00000030750
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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See PLOD1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 9 NC_080681.1 (121487917..121510696, complement)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004500632.1 (890345..913072, complement)

Chromosome 9 - NC_080681.1Genomic Context describing neighboring genes Neighboring gene migration and invasion inhibitory protein Neighboring gene mitofusin 2 Neighboring gene KIAA2013 ortholog Neighboring gene dihydrolipoyl dehydrogenase, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080681.1 Reference mDasNov1.hap2

    Range
    121487917..121510696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004482523.4 → XP_004482580.2  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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