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TBL1XR1 TBL1X/Y related 1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101413575, updated on 8-Mar-2024

Summary

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Gene symbol
TBL1XR1
Gene description
TBL1X/Y related 1
See related
Ensembl:ENSDNOG00000002317
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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See TBL1XR1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 4 NC_080676.1 (51226550..51388162, complement)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004467680.1 (1243973..1323566, complement)

Chromosome 4 - NC_080676.1Genomic Context describing neighboring genes Neighboring gene synaptonemal complex protein 2-like Neighboring gene small nucleolar RNA SNORA67 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box-like/WD repeat-containing protein TBL1XR1
Names
TBL1X receptor 1
transducin beta like 1 X-linked receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080676.1 Reference mDasNov1.hap2

    Range
    51226550..51388162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058295360.1 → XP_058151343.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X2

  2. XM_058295361.1 → XP_058151344.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X2

  3. XM_058295359.1 → XP_058151342.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X1

  4. XM_004451633.4 → XP_004451690.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X1

    See identical proteins and their annotated locations for XP_004451690.1

    Related
    ENSDNOP00000001800.3
    Conserved Domains (3) summary
    cd00200
    Location:164 → 470
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:228 → 264
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:7 → 31
    LisH

  5. XM_058295362.1 → XP_058151345.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X2

Nucleotide Protein
Heading Accession and Version

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