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HACL1 2-hydroxyacyl-CoA lyase 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101380715, updated on 8-Mar-2024

Summary

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Gene symbol
HACL1
Gene description
2-hydroxyacyl-CoA lyase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450676.1 (1610251..1643210)

NW_004450676.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 28 Neighboring gene biotinidase Neighboring gene collagen like tail subunit of asymmetric acetylcholinesterase Neighboring gene ELL associated factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450676.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid alpha-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacyl-CoA lyase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450676.1 Reference Oros_1.0 Primary Assembly

    Range
    1610251..1643210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012565478.1 → XP_012420932.1  2-hydroxyacyl-CoA lyase 1 isoform X3

    Conserved Domains (4) summary
    cd07035
    Location:21 → 148
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:19 → 537
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:353 → 536
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:182 → 308
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

  2. XM_004409101.2 → XP_004409158.1  2-hydroxyacyl-CoA lyase 1 isoform X6

    UniProtKB/TrEMBL
    A0A2U3WK22
    Conserved Domains (4) summary
    cd07035
    Location:21 → 175
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:19 → 564
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:380 → 563
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:209 → 335
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

  3. XM_004409102.2 → XP_004409159.1  2-hydroxyacyl-CoA lyase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2U3WJX6
    Conserved Domains (4) summary
    cd07035
    Location:21 → 175
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:19 → 555
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:380 → 554
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:209 → 335
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

  4. XM_012565477.1 → XP_012420931.1  2-hydroxyacyl-CoA lyase 1 isoform X1

    Conserved Domains (4) summary
    cd07035
    Location:21 → 175
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:19 → 579
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:380 → 563
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:209 → 335
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

  5. XM_012565479.1 → XP_012420933.1  2-hydroxyacyl-CoA lyase 1 isoform X4

    Conserved Domains (4) summary
    cd07035
    Location:21 → 149
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:19 → 504
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:320 → 503
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:183 → 308
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

  6. XM_012565480.1 → XP_012420934.1  2-hydroxyacyl-CoA lyase 1 isoform X5

    Conserved Domains (4) summary
    cd07035
    Location:21 → 106
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:19 → 482
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:298 → 481
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:127 → 253
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain
Nucleotide Protein
Heading Accession and Version

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