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EPB42 erythrocyte membrane protein band 4.2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101379462, updated on 8-Mar-2024

Summary

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Gene symbol
EPB42
Gene description
erythrocyte membrane protein band 4.2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450825.1 (960729..979477)

NW_004450825.1Genomic Context describing neighboring genes Neighboring gene transglutaminase 7 Neighboring gene transglutaminase 5 Neighboring gene cyclin D1 binding protein 1 Neighboring gene transmembrane protein 62 Neighboring gene uncharacterized protein C9orf9 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450825.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
erythrocyte membrane protein band 4.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450825.1 Reference Oros_1.0 Primary Assembly

    Range
    960729..979477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004411434.1 → XP_004411491.1  erythrocyte membrane protein band 4.2

    UniProtKB/TrEMBL
    A0A2U3WQJ9
    Conserved Domains (3) summary
    smart00460
    Location:262 → 350
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:7 → 123
    Transglut_N; Transglutaminase family
    pfam00927
    Location:591 → 689
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
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