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RIN1 Ras and Rab interactor 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101370077, updated on 8-Mar-2024

Summary

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Gene symbol
RIN1
Gene description
Ras and Rab interactor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See RIN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450289.1 (3809319..3814100)

NW_004450289.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene BRMS1 transcriptional repressor and anoikis regulator Neighboring gene CD248 molecule Neighboring gene transmembrane protein 151A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450289.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras and Rab interactor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450289.1 Reference Oros_1.0 Primary Assembly

    Range
    3809319..3814100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004393891.1 → XP_004393948.1  ras and Rab interactor 1

    UniProtKB/TrEMBL
    A0A2U3VH35
    Conserved Domains (3) summary
    smart00167
    Location:489 → 607
    VPS9; Domain present in VPS9
    cd10393
    Location:58 → 158
    SH2_RIN1; Src homology 2 (SH2) domain found in Ras and Rab interactor 1 (RIN1)-like proteins
    cl00155
    Location:627 → 704
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
Heading Accession and Version

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