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DENND4B DENN domain containing 4B [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101369134, updated on 8-Mar-2024

Summary

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Gene symbol
DENND4B
Gene description
DENN domain containing 4B
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See DENND4B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450441.1 (2247837..2261840)

NW_004450441.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 39 member 1 Neighboring gene CREB regulated transcription coactivator 2 Neighboring gene GATA zinc finger domain containing 2B Neighboring gene solute carrier family 27 member 3 Neighboring gene integrator complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450441.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: DENN domain-containing protein 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450441.1 Reference Oros_1.0 Primary Assembly

    Range
    2247837..2261840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004403059.1 → XP_004403116.1  LOW QUALITY PROTEIN: DENN domain-containing protein 4B

    UniProtKB/TrEMBL
    A0A2U3W4S6
    Conserved Domains (5) summary
    smart00801
    Location:563 → 636
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00800
    Location:191 → 279
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    sd00004
    Location:813 → 842
    PPR; PPR repeat [structural motif]
    pfam02141
    Location:313 → 497
    DENN; DENN (AEX-3) domain
    pfam13041
    Location:811 → 851
    PPR_2; PPR repeat family
Nucleotide Protein
Heading Accession and Version

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