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SPTSSA serine palmitoyltransferase small subunit A [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101368426, updated on 19-Jun-2024

Summary

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Gene symbol
SPTSSA
Gene description
serine palmitoyltransferase small subunit A
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See SPTSSA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450369.1 (5169236..5190988, complement)

NW_004450369.1Genomic Context describing neighboring genes Neighboring gene disrupted in renal carcinoma protein 2 pseudogene Neighboring gene vacuolar protein sorting-associated protein 72 homolog Neighboring gene E2F associated phosphoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450369.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase small subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450369.1 Reference Oros_1.0 Primary Assembly

    Range
    5169236..5190988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004399964.1 → XP_004400021.1  serine palmitoyltransferase small subunit A

    See identical proteins and their annotated locations for XP_004400021.1

    UniProtKB/TrEMBL
    A0A2U3VWY8, A0A9B0GLU5
    Conserved Domains (1) summary
    pfam11779
    Location:7 → 60
    SPT_ssu-like; Small subunit of serine palmitoyltransferase-like
Nucleotide Protein
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