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RBMS3 RNA binding motif single stranded interacting protein 3 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101339629, updated on 8-Mar-2024

Summary

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Gene symbol
RBMS3
Gene description
RNA binding motif single stranded interacting protein 3
See related
EnsemblRapid:ENSTTRG00000006202
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 10 NC_047043.1 (48210486..48926314)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844023.1 (13248591..13779787, complement)

Chromosome 10 - NC_047043.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene mitochondrial carrier homolog 1-like Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene DNA primase large subunit-like Neighboring gene 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase-like Neighboring gene heat shock protein beta-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(U) RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding motif, single-stranded-interacting protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047043.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    48210486..48926314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033864509.1 → XP_033720400.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J3S0L1
    Conserved Domains (2) summary
    cd12475
    Location:138 → 225
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:56 → 135
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  2. XM_033864508.1 → XP_033720399.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J3S1L7
    Conserved Domains (2) summary
    cd12475
    Location:139 → 226
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:57 → 136
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  3. XM_033864511.1 → XP_033720402.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A6J3S0J1
    Conserved Domains (3) summary
    TIGR01628
    Location:61 → 394
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12475
    Location:139 → 226
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:57 → 136
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  4. XM_033864512.1 → XP_033720403.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A6J3S0P8
    Conserved Domains (3) summary
    TIGR01628
    Location:61 → 393
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12475
    Location:139 → 226
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:57 → 136
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  5. XM_019946974.2 → XP_019802533.2  RNA-binding motif, single-stranded-interacting protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A2U4CAQ7
    Conserved Domains (2) summary
    cd12475
    Location:138 → 225
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:56 → 135
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  6. XM_019946975.2 → XP_019802534.2  RNA-binding motif, single-stranded-interacting protein 3 isoform X10

    UniProtKB/TrEMBL
    A0A2U4CAS0
    Conserved Domains (3) summary
    TIGR01628
    Location:60 → 392
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12475
    Location:138 → 225
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:56 → 135
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  7. XM_033864510.1 → XP_033720401.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A6J3S161
    Related
    ENSTTRP00000034316.1, ENSTTRT00000036673.1
    Conserved Domains (2) summary
    cd12475
    Location:139 → 226
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:57 → 136
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  8. XM_019946969.2 → XP_019802528.2  RNA-binding motif, single-stranded-interacting protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A2U4CAQ4
    Conserved Domains (2) summary
    cd12475
    Location:139 → 226
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:57 → 136
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  9. XM_019946970.2 → XP_019802529.2  RNA-binding motif, single-stranded-interacting protein 3 isoform X8

    UniProtKB/TrEMBL
    A0A2U4CAR5
    Related
    ENSTTRP00000028858.1, ENSTTRT00000034400.1
    Conserved Domains (3) summary
    TIGR01628
    Location:61 → 394
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12475
    Location:139 → 226
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:57 → 136
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  10. XM_033864513.1 → XP_033720404.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A6J3S1M3
    Conserved Domains (2) summary
    cd12475
    Location:105 → 192
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:23 → 102
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  11. XM_033864514.1 → XP_033720405.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A6J3S1M3
    Conserved Domains (2) summary
    cd12475
    Location:105 → 192
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
    cd12472
    Location:23 → 102
    RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)

  12. XM_033864515.1 → XP_033720406.1  RNA-binding motif, single-stranded-interacting protein 3 isoform X11

    UniProtKB/TrEMBL
    A0A6J3S163
    Conserved Domains (2) summary
    TIGR01628
    Location:28 → 231
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12475
    Location:26 → 113
    RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
Nucleotide Protein
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