U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NSMCE1 NSE1 homolog, SMC5-SMC6 complex component [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101315594, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NSMCE1
Gene description
NSE1 homolog, SMC5-SMC6 complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 15 NC_047048.1 (17460686..17491680)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844586.1 (6635961..6660627, complement)

Chromosome 15 - NC_047048.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117308024 Neighboring gene interleukin 4 receptor Neighboring gene lysine demethylase 8 Neighboring gene histone H1oo-like Neighboring gene 5S ribosomal RNA Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postreplication repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
non-structural maintenance of chromosomes element 1 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047048.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    17460686..17491680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033839123.1 → XP_033695014.1  non-structural maintenance of chromosomes element 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A6J3PYR2
    Conserved Domains (2) summary
    cd16493
    Location:191 → 234
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
    pfam07574
    Location:16 → 175
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex

  2. XM_033839125.1 → XP_033695016.1  non-structural maintenance of chromosomes element 1 homolog isoform X3

    UniProtKB/TrEMBL
    A0A6J3PY83
    Conserved Domains (2) summary
    cd16493
    Location:191 → 234
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
    pfam07574
    Location:16 → 175
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex

  3. XM_033839122.1 → XP_033695013.1  non-structural maintenance of chromosomes element 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A6J3PYR2
    Conserved Domains (2) summary
    cd16493
    Location:191 → 234
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
    pfam07574
    Location:16 → 175
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex

  4. XM_033839124.1 → XP_033695015.1  non-structural maintenance of chromosomes element 1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A6J3PY55
    Conserved Domains (2) summary
    cd16493
    Location:165 → 208
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
    pfam07574
    Location:16 → 149
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.